[R] Error in read.table(file = file, header = header, sep = sep, quote = quote, : more columns than column names
R. Michael Weylandt
michael.weylandt at gmail.com
Wed Feb 29 03:59:32 CET 2012
What is initialCuratedDF? I'm not seeing it in any standard location
so there's no way to debug it...
Also see inline.
On Tue, Feb 28, 2012 at 2:41 PM, Ben Ganzfried <ben.ganzfried at gmail.com> wrote:
> I just googled my error and many things came up. I followed the leads and
> read the ?read.delim page; I tried changing header = TRUE, and row.names =
> TRUE-- but I've still been having trouble fixing it, so I would greatly
> appreciate any help you can provide. Here is my code:
PLEASE don't ever do this -- it's potentially very destructive to
anyone who tries to copy your script to help you.
David also mentioned this when you posted the same code ~ 6 months ago.
> ## rm(list=ls()) ## ALWAYS WRAP IN COMMENTS IF YOU ARE GOING TO INSIST ON INCLUDING IT
> uncurated <- read.csv("../uncurated/GSE3141_full_pdata.csv", as.is
> celfile.dir <- "../../../DATA/GSE3141/RAW"
> ##initial creation of curated dataframe
> curated <- initialCuratedDF(rownames(uncurated),
> The error occurs when I run this line:
>> curated <- initialCuratedDF(rownames(uncurated),
> Error in read.table(file = file, header = header, sep = sep, quote = quote,
> more columns than column name
> I would greatly appreciate any help.
> [[alternative HTML version deleted]]
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
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