[R] rjags installation trouble

[Ben Bolker]

  Trying to install latest rjags (3-5) from CRAN with JAGS 3.2.0
installed on Ubuntu 10.04, with r-devel ... the bottom line is that it
fails while loading with

 /libs/rjags.so: undefined symbol: _ZN7Console15checkAdaptationERb

  Has anyone else seen this or is it a glitch somewhere in my system?

  thanks
    Ben Bolker

==================
bolker at ubuntu-10-new:~/R/pkgs/rjags$ jags
Welcome to JAGS 3.2.0 on Tue Jan 10 10:38:31 2012
JAGS is free software and comes with ABSOLUTELY NO WARRANTY
Loading module: basemod: ok
Loading module: bugs: ok
.

=======================

install.packages("rjags") starts out fine:

Installing package(s) into
‘/mnt/hgfs/bolker/Documents/LOCAL/lib/R/site-library’
(as ‘lib’ is unspecified)
trying URL 'http://probability.ca/cran/src/contrib/rjags_3-5.tar.gz'
Content type 'application/x-gzip' length 66429 bytes (64 Kb)
opened URL
==================================================
downloaded 64 Kb

* installing *source* package ‘rjags’ ...
** package ‘rjags’ successfully unpacked and MD5 sums checked
checking for prefix by checking for jags... /usr/bin/jags

  [snip snip]

** libs
g++ -I/usr/local/lib/R/include -DNDEBUG -I/usr/include/JAGS
-I/usr/local/include    -fpic  -g -O2  -c jags.cc -o jags.o
g++ -I/usr/local/lib/R/include -DNDEBUG -I/usr/include/JAGS
-I/usr/local/include    -fpic  -g -O2  -c parallel.cc -o parallel.o
g++ -shared -L/usr/local/lib -o rjags.so jags.o parallel.o -L/usr/lib -ljags
installing to /mnt/hgfs/bolker/Documents/LOCAL/lib/R/site-library/rjags/libs
** R

  [snip snip]

  but fails at:

** building package indices
Error : .onLoad failed in loadNamespace() for 'rjags', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object
'/mnt/hgfs/bolker/Documents/LOCAL/lib/R/site-library/rjags/libs/rjags.so':

/mnt/hgfs/bolker/Documents/LOCAL/lib/R/site-library/rjags/libs/rjags.so:
undefined symbol: _ZN7Console15checkAdaptationERb
ERROR: installing package indices failed
* removing ‘/mnt/hgfs/bolker/Documents/LOCAL/lib/R/site-library/rjags’
* restoring previous
‘/mnt/hgfs/bolker/Documents/LOCAL/lib/R/site-library/rjags’

The downloaded source packages are in
	‘/tmp/RtmpSKHIz5/downloaded_packages’
Warning message:
In install.packages("rjags") :
  installation of package ‘rjags’ had non-zero exit status
> sessionInfo()
R Under development (unstable) (2012-01-01 r58032)
Platform: i686-pc-linux-gnu (32-bit)

locale:
 [1] LC_CTYPE=en_CA.utf8       LC_NUMERIC=C
 [3] LC_TIME=en_CA.utf8        LC_COLLATE=en_CA.utf8
 [5] LC_MONETARY=en_CA.utf8    LC_MESSAGES=en_CA.utf8
 [7] LC_PAPER=C                LC_NAME=C
 [9] LC_ADDRESS=C              LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_CA.utf8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

loaded via a namespace (and not attached):
[1] tools_2.15.0