[R] Matrix package will not loead

Prof Brian Ripley ripley at stats.ox.ac.uk
Tue Nov 13 19:19:43 CET 2012


On 13/11/2012 13:28, Uzuner, Tolga I wrote:
> Many thanks for your advice and assistance.
>
> Sadly, I am unable to install "from source" as my operating environment does not have Rtools or a compiler.
>
> Is there an old version compiled somewhere I can use ?

Yes, in your 2.15.1 installation.  Since you seem to be installing into 
a personal library, I expect that if you delete Matrix from 
H:/R/win-library/2.15 you will get the originally installed one in .Library.

And if you updated .Library, simply re-install R 2.15.1.

However, the posting guide asked you to update before posting, and that 
is the nature of the Open Source contract: help which is available is 
only for the current version since that is always freely available.  If 
you want to use binary packages, we only supply those for current and 
future versions of R, and at CRAN's discretion for the final member of 
the last series (currently 2.14.2).

>
>
>
>> install.packages("H:\\Downloads\\Matrix_1.0-10.tar.gz", repos = NULL, type="source")
> Installing package(s) into 'H:/R/win-library/2.15'
> (as 'lib' is unspecified)
> * installing *source* package 'Matrix' ...
> ** package 'Matrix' successfully unpacked and MD5 sums checked
> ** libs
> ERROR: compilation failed for package 'Matrix'
> * removing 'H:/R/win-library/2.15/Matrix'
> Warning messages:
> 1: running command 'C:/PROGRA~1/R/R-215~1.1/bin/i386/R CMD INSTALL -l "H:/R/win-library/2.15"   "H:/Downloads/Matrix_1.0-10.tar.gz"' had status 1
> 2: In install.packages("H:\\Downloads\\Matrix_1.0-10.tar.gz", repos = NULL,  :
>    installation of package 'H:/Downloads/Matrix_1.0-10.tar.gz' had non-zero exit status
>> install.packages("Matrix", type="source")
> Installing package(s) into 'H:/R/win-library/2.15'
> (as 'lib' is unspecified)
> --- Please select a CRAN mirror for use in this session ---
> trying URL 'http://cran.ma.imperial.ac.uk/src/contrib/Matrix_1.0-9.tar.gz'
> Error in download.file(url, destfile, method, mode = "wb", ...) :
>    cannot open URL 'http://cran.ma.imperial.ac.uk/src/contrib/Matrix_1.0-9.tar.gz'
> In addition: Warning message:
> In download.file(url, destfile, method, mode = "wb", ...) :
>    cannot open: HTTP status was '404 Not Found'
> Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
>
>
> -----Original Message-----
> From: Prof Brian Ripley [mailto:ripley at stats.ox.ac.uk]
> Sent: 13 November 2012 13:03
> To: Duncan Murdoch
> Cc: Uzuner, Tolga I; r-help at r-project.org
> Subject: Re: [R] Matrix package will not loead
>
> You will find the problem and solution in the list archives.
>
> The current version of Matrix can be installed *from source* on R (>=
> 2.15.0), as it claims.  But if you install it on R >= 2.15.2 then it
> uses features of 2.15.2 and hence can only be run on R >= 2.15.2. And
> there was a warning about this ....
>
> On 13/11/2012 12:38, Duncan Murdoch wrote:
>> On 12-11-13 7:06 AM, Uzuner, Tolga I wrote:
>>> Dear Fellow R Users,
>>>
>>> I am having a problem with the Matrix package, in Windows XP on  R
>>> 2.15.1 .
>>>
>>> This is the only package where I experience this. I remove the package
>>> first, re install, and then when trying to load, get a LoadLibrary
>>> failure as below.
>>
>> I've just installed a binary copy of Matrix 1.0-10 in R 2.15.2 patched,
>> and I get an error too on attaching it:  "The procedure entry point
>> Rf_copyListMatrix could not be located in the dynamic link library
>> R.dll."  I'm pretty sure that procedure is available in R.dll currently,
>> so I don't know what the real problem is.
>
> The issue is if it is exported from R.dll, which only happened just
> before 2.15.2.  Works for me with the Matrix binary package on the CRAN
> master and both 2.15.2 and the current R-patched (which in any case
> contains that version).
>
>>
>> I have just rebuilt R, and the same package works fine.  So I'd suggest
>> that you download the latest R-patched from CRAN, and hopefully things
>> will be fine.
>>
>> Duncan Murdoch
>>
>>
>>>
>>> Thanks in advance for any assistance.
>>>
>>> Regards,
>>> Tolga
>>>
>>>
>>>> remove.packages("Matrix")
>>> Removing package(s) from 'H:/R/win-library/2.15'
>>> (as 'lib' is unspecified)
>>>> install.packages("Matrix")
>>> Installing package(s) into 'H:/R/win-library/2.15'
>>> (as 'lib' is unspecified)
>>> trying URL
>>> 'http://cran.ma.imperial.ac.uk/bin/windows/contrib/2.15/Matrix_1.0-10.zip'
>>>
>>> Content type 'application/zip' length 3289545 bytes (3.1 Mb)
>>> opened URL
>>> downloaded 3.1 Mb
>>>
>>> package 'Matrix' successfully unpacked and MD5 sums checked
>>>
>>> The downloaded binary packages are in
>>>           C:\Data\N048564\temp\RtmpoDC7HF\downloaded_packages
>>>> library("Matrix")
>>> Error in inDL(x, as.logical(local), as.logical(now), ...) :
>>>     unable to load shared object
>>> 'H:/R/win-library/2.15/Matrix/libs/i386/Matrix.dll':
>>>     LoadLibrary failure:  The specified procedure could not be found.
>>>
>>> In addition: Warning message:
>>> package 'Matrix' was built under R version 2.15.2
>>> Error: package/namespace load failed for 'Matrix'
>>>>
>>>
>>>
>>>
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>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>
>


-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595




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