[R] timereg

Uwe Ligges ligges at statistik.tu-dortmund.de
Tue Aug 6 11:06:00 CEST 2013



On 05.08.2013 20:27, Silvano wrote:
> Hi,
>
> I tried to fit a model using a timecox function in R version 3.0.0,
> using sTRACE data  present in survival package.
>
> If I use the 2.9.0 version, I don't have problems, but in 3.0.0 version,
> I get the following error message:
>
>> out <- timecox(Surv(time/365, status==9) ~ age+sex+diabetes+chf+vf,
>> sTRACE, max.time=7, n.sim=500)
>
> Error in .C("OStimecox", as.double(times), as.integer(Ntimes),
> as.double(designX),  :
>   "OStimecox" not available for .C() for package "timereg"
>
> I don't know what's happend.

Perhaps an old package that was not built for R-3.0.0 or some old code 
in your wokrspace?

Uwe Ligges

>
> I would like use 3.0.0 version, but I don't know what's wrong. Somebody
> help me?
>
>
> Also, when I use the aalen model I get differents results in 3.0.0 and
> 2.9.0 versions. Why?
>
> Version 3.0.0:
>
>> fit1.semi <- aalen(Surv(time/365, status==9)~age+sex+diabetes+chf+vf,
>> sTRACE,max.time=7,n.sim=500)
>> summary(fit1.semi)
>
> Additive Aalen Model
>
> Test for nonparametric terms
>
> Test for non-significant effects
>             Supremum-test of significance p-value H_0: B(t)=0
> (Intercept)                          7.29 0.000
> age                                  8.63 0.000
> sex                                  2.95 0.060
> diabetes                             2.31 0.240
> chf                                  5.30 0.000
> vf                                   2.95 0.042
>
> Test for time invariant effects
>                   Kolmogorov-Smirnov test p-value H_0:constant effect
> (Intercept)                       0.68600 0.006
> age                               0.00934 0.008
> sex                               0.16900 0.078
> diabetes                          0.22100 0.184
> chf                               0.14800 0.176
> vf                                0.46100 0.008
>
>
> in 2.9.0 version:
>
>> fit1.semi <- aalen(Surv(time/365, status==9)~age+sex+diabetes+chf+vf,
>> sTRACE,max.time=7,n.sim=500)
>> summary(fit1.semi)
> Additive Aalen Model
>
> Test for nonparametric terms
>
> Test for non-significant effects
>             sup|  hat B(t)/SD(t) | p-value H_0: B(t)=0
> (Intercept)                   7.29               0.000
> age                           8.63               0.000
> sex                           2.95               0.052
> diabetes                      2.31               0.246
> chf                           5.30               0.000
> vf                            2.95               0.026
>
> Test for time invariant effects
>             sup| B(t) - (t/tau)B(tau)| p-value H_0: B(t)=b t
> (Intercept)                    0.68600                 0.004
> age                            0.00934                 0.004
> sex                            0.16900                 0.084
> diabetes                       0.22100                 0.208
> chf                            0.14800                 0.158
> vf                             0.46100                 0.004
>
> part of them...
>
>
> Thanks a lot,
>
> --------------------------------------
> Silvano Cesar da Costa
> Departamento de Estatística
> Universidade Estadual de Londrina
> Fone: 3371-4346
>
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