[R] Manhattan Plot
msuzen at gmail.com
Tue Jan 8 20:19:13 CET 2013
Have you tried ggbio package's plotGrandLinear from bioconductor?
On 8 January 2013 20:03, Einat Granot <einatgranot at gmail.com> wrote:
> I am trying to create a simple Manhattan plot for a small list of 200 SNPs
> spread out in the genome in different genes.
> I have tried different functions (using ggplot2 and a function created by
> Stephen Turner, mhtplot etc.)-none of them work smoothly.
> Does anyone have a simple way to create the plot (not for all 22
> chromosomes)- with the x axis showing the genes name and not the chromosomal
> Thanks a lot,
> [[alternative HTML version deleted]]
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