[R] Updating R and Bioconductor packages in a different folder.

[Prof Brian Ripley]

On 06/03/2014 09:51, Luca Cerone wrote:
> Dear all,
> I use R on a server on which I don't have administrative access.
> I would like to update some of the R and Bioconductor packages I use
> for my daily analysis,
> however some of those packages are installed system-wide.
> I would like to know how I can update those packages installing them
> in my ~/R/ folder, and if this would cause any incompatibility.
>
> So how can I get a list of packages that needs updating and force the
> update to install them in my local folder?

It sounds like you want the 'instlib' argument to update.packages().

But if not, study the code of update.packages and modify to suit.

> Thanks a lot in advance for all the help,
>
> Cheers,
> Luca

-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
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