[R] Help installing pbdNCDF4 package
Kirill Fedotov
kfedotov at fulcrm.com
Fri Jan 9 15:52:16 CET 2015
Hello,
I've been having trouble installing pbdNCDF4 package into R 3.1.2
environment.
After a lengthy batter with compiling all the libs necessary for the
ncdf package I am running into this error.
Prior to this error, all the error I had were due to a missing libs
(HDF4 and not finding nc-config)
The list of installed packages is at the end of the email
Thank you
/[kfedotov at pnccentos-nji-01 src]$ sudo /usr/local/bin/R CMD INSTALL
pbdNCDF4//
//* installing to library ‘/usr/local/lib64/R/library’//
//* installing *source* package ‘pbdNCDF4’ ...//
//** package ‘pbdNCDF4’ successfully unpacked and MD5 sums checked//
//checking for nc-config... yes//
//Netcdf library version: netCDF 4.3.2//
//Netcdf library has version 4 interface present: yes//
//Netcdf library was compiled with C compiler: gcc//
//configure: creating ./config.status//
//config.status: creating src/Makevars//
//configure: creating ./config.status//
//config.status: creating src/Makevars//
//config.status: creating R/zzz.R//
//
//****************** Results of ncdf4 package configure
*******************//
//
//SPMD_CPPFLAGS = -I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI//
//SPMD_LDFLAGS = -L/usr/lib64/openmpi/lib -lmpi -lutil -lpthread//
//NETCDF_HEADER = /usr/local/include/netcdf_par.h//
//NETCDF_INCLUDE = 0//
//NETCDF_PAR = FALSE//
//NETCDF_PAR_OBJS =//
//netCDF v4 CPP flags = -I/usr/local/include -Iusr/local/include//
//netCDF v4 LD flags = -L/usr/local/lib -lnetcdf//
//netCDF v4 runtime path =//
//
//*************************************************************************//
//
//** libs//
//make: Nothing to be done for `all'.//
//installing via 'install.libs.R' to /usr/local/lib64/R/library/pbdNCDF4//
//** R//
//** demo//
//** inst//
//** preparing package for lazy loading//
//** help//
//*** installing help indices//
//** building package indices//
//** installing vignettes//
// ‘pbdNCDF4-guide.Rnw’//
//** testing if installed package can be loaded//
//Error : .onLoad failed in loadNamespace() for 'pbdNCDF4', details://
// call: dyn.load(file, DLLpath = DLLpath, ...)//
// error: unable to load shared object
'/usr/local/lib64/R/library/pbdNCDF4/libs/pbdNCDF4.so'://
// libmpi.so.1: cannot open shared object file: No such file or directory//
//Error: loading failed//
//Execution halted//
//ERROR: loading failed//
//* removing ‘/usr/local/lib64/R/library/pbdNCDF4’//
/
Same error from the R environment itself ( as expected )
> install.packages("pbdNCDF4")
--- Please select a CRAN mirror for use in this session ---
CRAN mirror
1: 0-Cloud 2: Argentina (La Plata)
3: Australia (Canberra) 4: Australia (Melbourne)
5: Austria 6: Belgium
7: Brazil (BA) 8: Brazil (PR)
9: Brazil (RJ) 10: Brazil (SP 1)
11: Brazil (SP 2) 12: Canada (BC)
13: Canada (NS) 14: Canada (ON)
15: Canada (QC 1) 16: Canada (QC 2)
17: Chile 18: China (Beijing 1)
19: China (Beijing 2) 20: China (Hefei)
21: China (Lanzhou) 22: China (Xiamen)
23: Colombia (Bogota) 24: Colombia (Cali)
25: Czech Republic 26: Denmark
27: Ecuador 28: El Salvador
29: Estonia 30: France (Lyon 1)
31: France (Lyon 2) 32: France (Montpellier)
33: France (Paris 1) 34: France (Paris 2)
35: France (Strasbourg) 36: Germany (Berlin)
37: Germany (Bonn) 38: Germany (Goettingen)
39: Germany (Frankfurt) 40: Germany (Münster)
41: Greece 42: Hungary
43: Iceland 44: India
45: Indonesia (Jakarta) 46: Indonesia (Jember)
47: Iran 48: Ireland
49: Italy (Milano) 50: Italy (Padua)
51: Italy (Palermo) 52: Japan (Tokyo)
53: Japan (Tsukuba) 54: Korea (Seoul 1)
55: Korea (Seoul 2) 56: Korea (Ulsan)
57: Lebanon 58: Mexico (Mexico City)
59: Mexico (Texcoco) 60: Netherlands (Amsterdam)
61: Netherlands (Utrecht) 62: New Zealand
63: Norway 64: Philippines
65: Poland 66: Portugal
67: Russia 68: Singapore
69: Slovakia 70: South Africa (Cape Town)
71: South Africa (Johannesburg) 72: Spain (A Coruña)
73: Spain (Madrid) 74: Sweden
75: Switzerland 76: Taiwan (Chungli)
77: Taiwan (Taichung) 78: Taiwan (Taipei)
79: Thailand 80: Turkey
81: UK (Bristol) 82: UK (Cambridge)
83: UK (London) 84: UK (London)
85: UK (St Andrews) 86: USA (CA 1)
87: USA (CA 2) 88: USA (IA)
89: USA (IN) 90: USA (KS)
91: USA (MD) 92: USA (MI)
93: USA (MO) 94: USA (OH)
95: USA (OR) 96: USA (PA 1)
97: USA (PA 2) 98: USA (TN)
99: USA (TX 1) 100: USA (WA 1)
101: USA (WA 2) 102: Venezuela
103: Vietnam
Selection: 88
trying URL
'http://streaming.stat.iastate.edu/CRAN/src/contrib/pbdNCDF4_0.1-4.tar.gz'
Content type 'application/x-gzip' length 312700 bytes (305 Kb)
opened URL
==================================================
downloaded 305 Kb
* installing *source* package ‘pbdNCDF4’ ...
** package ‘pbdNCDF4’ successfully unpacked and MD5 sums checked
checking for nc-config... yes
Netcdf library version: netCDF 4.3.2
Netcdf library has version 4 interface present: yes
Netcdf library was compiled with C compiler: gcc
configure: creating ./config.status
config.status: creating src/Makevars
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/zzz.R
****************** Results of ncdf4 package configure *******************
SPMD_CPPFLAGS = -I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI
SPMD_LDFLAGS = -L/usr/lib64/openmpi/lib -lmpi -lutil -lpthread
NETCDF_HEADER = /usr/local/include/netcdf_par.h
NETCDF_INCLUDE = 0
NETCDF_PAR = FALSE
NETCDF_PAR_OBJS =
netCDF v4 CPP flags = -I/usr/local/include -Iusr/local/include
netCDF v4 LD flags = -L/usr/local/lib -lnetcdf
netCDF v4 runtime path =
*************************************************************************
** libs
echo "SPMD_CPPFLAGS = -I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI" >
Makeconf
echo "SPMD_LDFLAGS = -L/usr/lib64/openmpi/lib -lmpi -lutil -lpthread"
>> Makeconf
echo "NETCDF_HEADER = /usr/local/include/netcdf_par.h" >> Makeconf
echo "NETCDF_INCLUDE = 0" >> Makeconf
echo "NETCDF_PAR = FALSE" >> Makeconf
echo "NETCDF_PAR_OBJS = " >> Makeconf
echo "NETCDF_CPPFLAGS = -I/usr/local/include -Iusr/local/include
-DNETCDF_INCLUDE=0" >> Makeconf
echo "NETCDF_LDFLAGS = -L/usr/local/lib -lnetcdf" >> Makeconf
echo "NETCDF_RPATH = " >> Makeconf
echo "HAVE_NETCDF = TRUE" >> Makeconf
echo "PKG_CPPFLAGS = -I/usr/local/include -Iusr/local/include
-DNETCDF_INCLUDE=0 -I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI" >>
Makeconf
echo "PKG_LIBS = -L/usr/local/lib -lnetcdf -L/usr/lib64/openmpi/lib
-lmpi -lutil -lpthread" >> Makeconf
gcc -std=gnu99 -I/usr/local/lib64/R/include -DNDEBUG
-I/usr/local/include -Iusr/local/include -DNETCDF_INCLUDE=0
-I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI -I/usr/local/include
-fpic -g -O2 -c ncdf2.c -o ncdf2.o
gcc -std=gnu99 -I/usr/local/lib64/R/include -DNDEBUG
-I/usr/local/include -Iusr/local/include -DNETCDF_INCLUDE=0
-I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI -I/usr/local/include
-fpic -g -O2 -c ncdf3.c -o ncdf3.o
gcc -std=gnu99 -I/usr/local/lib64/R/include -DNDEBUG
-I/usr/local/include -Iusr/local/include -DNETCDF_INCLUDE=0
-I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI -I/usr/local/include
-fpic -g -O2 -c ncdf.c -o ncdf.o
gcc -std=gnu99 -I/usr/local/lib64/R/include -DNDEBUG
-I/usr/local/include -Iusr/local/include -DNETCDF_INCLUDE=0
-I/usr/include/openmpi-x86_64 -DMPI2 -DOPENMPI -I/usr/local/include
-fpic -g -O2 -c src_ncdf4.c -o src_ncdf4.o
gcc -std=gnu99 -shared -L/usr/local/lib64/R/lib -L/usr/local/lib64 -o
pbdNCDF4.so ncdf2.o ncdf3.o ncdf.o src_ncdf4.o -L/usr/local/lib -lnetcdf
-L/usr/lib64/openmpi/lib -lmpi -lutil -lpthread -L/usr/local/lib64/R/lib -lR
installing via 'install.libs.R' to /usr/local/lib64/R/library/pbdNCDF4
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
‘pbdNCDF4-guide.Rnw’
** testing if installed package can be loaded
Error : .onLoad failed in loadNamespace() for 'pbdNCDF4', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object
'/usr/local/lib64/R/library/pbdNCDF4/libs/pbdNCDF4.so':
libmpi.so.1: cannot open shared object file: No such file or directory
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/usr/local/lib64/R/library/pbdNCDF4’
The downloaded source packages are in
‘/tmp/RtmpM8r4oj/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning message:
In install.packages("pbdNCDF4") :
installation of package ‘pbdNCDF4’ had non-zero exit status
The list of packages that are installed currently:
> installed.packages()
Package LibPath Version
base "base" "/usr/local/lib64/R/library" "3.1.2"
boot "boot" "/usr/local/lib64/R/library" "1.3-13"
class "class" "/usr/local/lib64/R/library" "7.3-11"
cluster "cluster" "/usr/local/lib64/R/library" "1.15.3"
codetools "codetools" "/usr/local/lib64/R/library" "0.2-9"
colorspace "colorspace" "/usr/local/lib64/R/library" "1.2-4"
compiler "compiler" "/usr/local/lib64/R/library" "3.1.2"
datasets "datasets" "/usr/local/lib64/R/library" "3.1.2"
dichromat "dichromat" "/usr/local/lib64/R/library" "2.0-0"
digest "digest" "/usr/local/lib64/R/library" "0.6.6"
foreign "foreign" "/usr/local/lib64/R/library" "0.8-61"
ggplot2 "ggplot2" "/usr/local/lib64/R/library" "1.0.0"
graphics "graphics" "/usr/local/lib64/R/library" "3.1.2"
grDevices "grDevices" "/usr/local/lib64/R/library" "3.1.2"
grid "grid" "/usr/local/lib64/R/library" "3.1.2"
gridExtra "gridExtra" "/usr/local/lib64/R/library" "0.9.1"
gtable "gtable" "/usr/local/lib64/R/library" "0.1.2"
KernSmooth "KernSmooth" "/usr/local/lib64/R/library" "2.23-13"
labeling "labeling" "/usr/local/lib64/R/library" "0.3"
lattice "lattice" "/usr/local/lib64/R/library" "0.20-29"
MASS "MASS" "/usr/local/lib64/R/library" "7.3-35"
Matrix "Matrix" "/usr/local/lib64/R/library" "1.1-4"
methods "methods" "/usr/local/lib64/R/library" "3.1.2"
mgcv "mgcv" "/usr/local/lib64/R/library" "1.8-3"
munsell "munsell" "/usr/local/lib64/R/library" "0.4.2"
ncdf "ncdf" "/usr/local/lib64/R/library" "1.6.8"
nlme "nlme" "/usr/local/lib64/R/library" "3.1-118"
nnet "nnet" "/usr/local/lib64/R/library" "7.3-8"
parallel "parallel" "/usr/local/lib64/R/library" "3.1.2"
pbdBASE "pbdBASE" "/usr/local/lib64/R/library" "0.2-3"
pbdDEMO "pbdDEMO" "/usr/local/lib64/R/library" "0.2-0"
pbdDMAT "pbdDMAT" "/usr/local/lib64/R/library" "0.2-3"
pbdMPI "pbdMPI" "/usr/local/lib64/R/library" "0.2-5"
pbdPROF "pbdPROF" "/usr/local/lib64/R/library" "0.2-3"
pbdSLAP "pbdSLAP" "/usr/local/lib64/R/library" "0.1-9"
plyr "plyr" "/usr/local/lib64/R/library" "1.8.1"
proto "proto" "/usr/local/lib64/R/library" "0.3-10"
RColorBrewer "RColorBrewer" "/usr/local/lib64/R/library" "1.1-2"
Rcpp "Rcpp" "/usr/local/lib64/R/library" "0.11.3"
reshape2 "reshape2" "/usr/local/lib64/R/library" "1.4.1"
rlecuyer "rlecuyer" "/usr/local/lib64/R/library" "0.3-3"
RNetCDF "RNetCDF" "/usr/local/lib64/R/library" "1.6.3-1"
rpart "rpart" "/usr/local/lib64/R/library" "4.1-8"
scales "scales" "/usr/local/lib64/R/library" "0.2.4"
spatial "spatial" "/usr/local/lib64/R/library" "7.3-8"
splines "splines" "/usr/local/lib64/R/library" "3.1.2"
stats "stats" "/usr/local/lib64/R/library" "3.1.2"
stats4 "stats4" "/usr/local/lib64/R/library" "3.1.2"
stringr "stringr" "/usr/local/lib64/R/library" "0.6.2"
survival "survival" "/usr/local/lib64/R/library" "2.37-7"
tcltk "tcltk" "/usr/local/lib64/R/library" "3.1.2"
tools "tools" "/usr/local/lib64/R/library" "3.1.2"
utils "utils" "/usr/local/lib64/R/library" "3.1.2"
Priority
base "base"
boot "recommended"
class "recommended"
cluster "recommended"
codetools "recommended"
colorspace NA
compiler "base"
datasets "base"
dichromat NA
digest NA
foreign "recommended"
ggplot2 NA
graphics "base"
grDevices "base"
grid "base"
gridExtra NA
gtable NA
KernSmooth "recommended"
labeling NA
lattice "recommended"
MASS "recommended"
Matrix "recommended"
methods "base"
mgcv "recommended"
munsell NA
ncdf NA
nlme "recommended"
nnet "recommended"
parallel "base"
pbdBASE NA
pbdDEMO NA
pbdDMAT NA
pbdMPI NA
pbdPROF NA
pbdSLAP NA
plyr NA
proto NA
RColorBrewer NA
Rcpp NA
reshape2 NA
rlecuyer NA
RNetCDF NA
rpart "recommended"
scales NA
spatial "recommended"
splines "base"
stats "base"
stats4 "base"
stringr NA
survival "recommended"
tcltk "base"
tools "base"
utils "base"
Depends
base NA
boot "R (>= 3.0.0), graphics, stats"
class "R (>= 3.0.0), stats, utils"
cluster "R (>= 2.12.0), stats, utils"
codetools "R (>= 2.1)"
colorspace "R (>= 2.13.0), methods"
compiler NA
datasets NA
dichromat "R (>= 2.10), stats"
digest "R (>= 2.4.1)"
foreign "R (>= 3.0.0), stats"
ggplot2 "R (>= 2.14), stats, methods"
graphics NA
grDevices NA
grid NA
gridExtra "R(>= 2.5.0), grid"
gtable "R (>= 2.14), grid"
KernSmooth "R (>= 2.5.0), stats"
labeling NA
lattice "R (>= 2.15.1)"
MASS "R (>= 3.0.0), grDevices, graphics, stats, utils"
Matrix "R (>= 2.15.2), methods"
methods NA
mgcv "R (>= 2.14.0), nlme (>= 3.1-64)"
munsell NA
ncdf NA
nlme "graphics, stats, R (>= 3.0.0)"
nnet "R (>= 2.14.0), stats, utils"
parallel NA
pbdBASE "R (>= 2.14.0), methods, rlecuyer, pbdMPI (>= 0.2-1),
pbdSLAP\n(>= 0.1-6)"
pbdDEMO "R (>= 3.0.0), methods, rlecuyer, pbdMPI (>= 0.2-2),
pbdSLAP\n(>= 0.1-7), pbdBASE (>= 0.2-3), pbdDMAT(>= 0.2-3)"
pbdDMAT "R (>= 2.14.0), methods, rlecuyer, pbdMPI (>= 0.2-1),
pbdSLAP\n(>= 0.1-6), pbdBASE (>= 0.2-3)"
pbdMPI "R (>= 3.0.0), methods, rlecuyer"
pbdPROF "R (>= 3.0.0), methods, graphics, grid, ggplot2,
gridExtra,\nreshape2"
pbdSLAP "R (>= 3.0.0), methods, rlecuyer, pbdMPI (>= 0.2-3)"
plyr "R (>= 2.11.0)"
proto NA
RColorBrewer "R (>= 2.0.0)"
Rcpp "R (>= 3.0.0)"
reshape2 NA
rlecuyer NA
RNetCDF "R (>= 2.4.0)"
rpart "R (>= 2.15.0), graphics, stats, grDevices"
scales "R (>= 2.13)"
spatial "R (>= 3.0.0), graphics, stats, utils"
splines NA
stats NA
stats4 NA
stringr "R (>= 2.14)"
survival "stats, utils, graphics, splines, R (>= 2.13.0)"
tcltk NA
tools NA
utils NA
Imports
base NA
boot NA
class "MASS"
cluster "graphics, grDevices"
codetools NA
colorspace NA
compiler NA
datasets NA
dichromat NA
digest NA
foreign "methods, utils"
ggplot2 "plyr (>= 1.7.1), digest, grid, gtable (>= 0.1.1),
reshape2,\nscales (>= 0.2.3), proto, MASS"
graphics "grDevices"
grDevices NA
grid "grDevices"
gridExtra NA
gtable NA
KernSmooth NA
labeling NA
lattice "grid, grDevices, graphics, stats, utils"
MASS NA
Matrix "graphics, grid, stats, utils, lattice"
methods "utils"
mgcv "methods, stats, graphics, Matrix"
munsell "colorspace"
ncdf NA
nlme "lattice"
nnet NA
parallel "tools"
pbdBASE NA
pbdDEMO NA
pbdDMAT NA
pbdMPI NA
pbdPROF NA
pbdSLAP NA
plyr "Rcpp (>= 0.11.0)"
proto NA
RColorBrewer NA
Rcpp "methods"
reshape2 "plyr (>= 1.8.1), stringr, Rcpp"
rlecuyer NA
RNetCDF NA
rpart NA
scales "RColorBrewer, dichromat, munsell (>= 0.2), plyr (>=
1.2),\nlabeling, methods"
spatial NA
splines "graphics, stats"
stats NA
stats4 "graphics, methods, stats"
stringr NA
survival NA
tcltk "utils"
tools NA
utils NA
LinkingTo
base NA
boot NA
class NA
cluster NA
codetools NA
colorspace NA
compiler NA
datasets NA
dichromat NA
digest NA
foreign NA
ggplot2 NA
graphics NA
grDevices NA
grid NA
gridExtra NA
gtable NA
KernSmooth NA
labeling NA
lattice NA
MASS NA
Matrix NA
methods NA
mgcv NA
munsell NA
ncdf NA
nlme NA
nnet NA
parallel NA
pbdBASE NA
pbdDEMO NA
pbdDMAT NA
pbdMPI NA
pbdPROF NA
pbdSLAP NA
plyr "Rcpp"
proto NA
RColorBrewer NA
Rcpp NA
reshape2 "Rcpp"
rlecuyer NA
RNetCDF NA
rpart NA
scales NA
spatial NA
splines NA
stats NA
stats4 NA
stringr NA
survival NA
tcltk NA
tools NA
utils NA
Suggests
base NA
boot "MASS, survival"
class NA
cluster "MASS"
codetools NA
colorspace "KernSmooth, MASS, kernlab, mvtnorm, vcd, tcltk, dichromat"
compiler NA
datasets NA
dichromat NA
digest NA
foreign NA
ggplot2 "quantreg, Hmisc, mapproj, maps, hexbin, maptools,
multcomp,\nnlme, testthat, knitr, mgcv"
graphics NA
grDevices NA
grid "lattice"
gridExtra "RGraphics, pixmap, EBImage, ggplot2, lattice"
gtable "testthat, plyr"
KernSmooth "MASS"
labeling NA
lattice "KernSmooth, MASS"
MASS "lattice, nlme, nnet, survival"
Matrix "expm, MASS"
methods NA
mgcv "splines, parallel, survival, MASS"
munsell "ggplot2 (>= 0.9.2)"
ncdf NA
nlme "Hmisc, MASS"
nnet "MASS"
parallel NA
pbdBASE NA
pbdDEMO NA
pbdDMAT NA
pbdMPI NA
pbdPROF NA
pbdSLAP NA
plyr "abind, testthat, tcltk, foreach, doMC, itertools, iterators"
proto "graph, Rgraphviz"
RColorBrewer NA
Rcpp "RUnit, inline, rbenchmark, highlight, pkgKitten (>= 0.1.2)"
reshape2 "testthat (>= 0.8.0), lattice"
rlecuyer NA
RNetCDF NA
rpart "survival"
scales "testthat (>= 0.8)"
spatial "MASS"
splines NA
stats NA
stats4 NA
stringr "testthat (>= 0.3)"
survival NA
tcltk NA
tools NA
utils NA
Enhances
base NA
boot NA
class NA
cluster NA
codetools NA
colorspace NA
compiler NA
datasets NA
dichromat NA
digest NA
foreign NA
ggplot2 "sp"
graphics NA
grDevices NA
grid NA
gridExtra NA
gtable NA
KernSmooth NA
labeling NA
lattice "chron"
MASS NA
Matrix "MatrixModels, graph, SparseM, sfsmisc"
methods NA
mgcv NA
munsell NA
ncdf NA
nlme NA
nnet NA
parallel "snow, nws, Rmpi"
pbdBASE NA
pbdDEMO "maps, RColorBrewer, pbdNCDF4 (>= 0.1-1), pmclust,
MixSim,\nEMCluster, sqldf, phyclust, MASS"
pbdDMAT NA
pbdMPI "pbdPROF"
pbdPROF NA
pbdSLAP NA
plyr NA
proto NA
RColorBrewer NA
Rcpp NA
reshape2 NA
rlecuyer NA
RNetCDF NA
rpart NA
scales NA
spatial NA
splines NA
stats NA
stats4 NA
stringr NA
survival NA
tcltk NA
tools NA
utils NA
License License_is_FOSS
base "Part of R 3.1.2" NA
boot "Unlimited" NA
class "GPL-2 | GPL-3" NA
cluster "GPL (>= 2)" NA
codetools "GPL" NA
colorspace "BSD_3_clause + file LICENSE" NA
compiler "Part of R 3.1.2" NA
datasets "Part of R 3.1.2" NA
dichromat "GPL-2" NA
digest "GPL-2" NA
foreign "GPL (>= 2)" NA
ggplot2 "GPL-2" NA
graphics "Part of R 3.1.2" NA
grDevices "Part of R 3.1.2" NA
grid "Part of R 3.1.2" NA
gridExtra "GPL (>= 2)" NA
gtable "GPL-2" NA
KernSmooth "Unlimited" NA
labeling "MIT + file LICENSE | Unlimited" NA
lattice "GPL (>= 2)" NA
MASS "GPL-2 | GPL-3" NA
Matrix "GPL (>= 2)" NA
methods "Part of R 3.1.2" NA
mgcv "GPL (>= 2)" NA
munsell "MIT + file LICENSE" NA
ncdf "GPL (>= 2)" NA
nlme "GPL (>= 2)" NA
nnet "GPL-2 | GPL-3" NA
parallel "Part of R 3.1.2" NA
pbdBASE "Mozilla Public License 2.0" NA
pbdDEMO "GPL (>= 2)" NA
pbdDMAT "GPL (>= 2)" NA
pbdMPI "Mozilla Public License 2.0" NA
pbdPROF "Mozilla Public License 2.0" NA
pbdSLAP "Mozilla Public License 2.0" NA
plyr "MIT + file LICENSE" NA
proto "GPL-2" NA
RColorBrewer "Apache License 2.0" NA
Rcpp "GPL (>= 2)" NA
reshape2 "MIT + file LICENSE" NA
rlecuyer "GPL (>= 2)" NA
RNetCDF "GPL (>= 2)" NA
rpart "GPL-2 | GPL-3" NA
scales "MIT + file LICENSE" NA
spatial "GPL-2 | GPL-3" NA
splines "Part of R 3.1.2" NA
stats "Part of R 3.1.2" NA
stats4 "Part of R 3.1.2" NA
stringr "GPL-2" NA
survival "LGPL (>= 2)" NA
tcltk "Part of R 3.1.2" NA
tools "Part of R 3.1.2" NA
utils "Part of R 3.1.2" NA
License_restricts_use OS_type MD5sum NeedsCompilation Built
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codetools NA NA NA "no" "3.1.2"
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compiler NA NA NA NA "3.1.2"
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grDevices NA NA NA NA "3.1.2"
grid NA NA NA NA "3.1.2"
gridExtra NA NA NA NA "3.1.2"
gtable NA NA NA NA "3.1.2"
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methods NA NA NA NA "3.1.2"
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munsell NA NA NA "no" "3.1.2"
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nlme NA NA NA "yes" "3.1.2"
nnet NA NA NA "yes" "3.1.2"
parallel NA NA NA NA "3.1.2"
pbdBASE NA NA NA "Yes" "3.1.2"
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pbdPROF NA NA NA "yes" "3.1.2"
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plyr NA NA NA "yes" "3.1.2"
proto NA NA NA NA "3.1.2"
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rlecuyer NA NA NA NA "3.1.2"
RNetCDF NA NA NA "yes" "3.1.2"
rpart NA NA NA "yes" "3.1.2"
scales NA NA NA "no" "3.1.2"
spatial NA NA NA "yes" "3.1.2"
splines NA NA NA NA "3.1.2"
stats NA NA NA NA "3.1.2"
stats4 NA NA NA NA "3.1.2"
stringr NA NA NA NA "3.1.2"
survival NA NA NA "yes" "3.1.2"
tcltk NA NA NA NA "3.1.2"
tools NA NA NA NA "3.1.2"
utils NA NA NA NA "3.1.2"
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