[R] Graph with ggplot2.

Thierry Onkelinx thierry.onkelinx at inbo.be
Wed Mar 25 16:17:36 CET 2015


You need to define limits as defined in the data. ylim(0, 1) instead of
ylim(0%, 100%)

ylim(0%, 100%) is incorrect R syntax.

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

To call in the statistician after the experiment is done may be no more
than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not
ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey

2015-03-25 15:02 GMT+01:00 BenedettaB24 . <benedetta.brunetti op gmail.com>:

> Dear all,
>
> I want to run ggplot2 in one of my file.
> I do this:
>
> mergefile<- read.csv("path of my file/name.csv")
>
> library(ggplot2)   to import my library
>
> ggplot(percent, aes(x=factor(Cell.lines), y=Percentage, vjust=-0.5,
> fill=Prostate )) + geom_bar(colour="black", stat="identity",
> position=position_dodge(), size=.3)+ylim(0%,100%)+xlab("Prostate cell
> lines")+ylab("Percentage of overlapping")+ggtitle("Comparison between
> cell lines against the prostate cancer lines from DNase
> esperiment")+theme_bw()+theme(axis.text.x=element_text(angle = 90,
> vjust = 0.5))
>
> i used this command three times, but now is not working, the error reported
> is:
>
> Error: unexpected ')' in "ggplot(percent, aes(x=factor(Cell.lines),
> y=Percentage, vjust=-0.5, fill=Prostate )) + geom_bar(colour="black",
> stat="identity", position=position_dodge(), size=.3)+ylim(0%,100%)"
>
>
> Can some one help me? any suggestions?
>
> Thanks a lot!
>
> Best regards, Benedetta
>
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>
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