[R] R Package installation

David Winsemius dwinsemius at comcast.net
Fri Aug 12 20:09:55 CEST 2016


> On Aug 12, 2016, at 7:48 AM, Dayalan, Nithya <nithya.dayalan at merck.com> wrote:
> 
> Hi Jeff,
> 
> Before selecting the mirror I am receiving the error: I can able connect internet in server

Sorry for the blank message just now, but it appears that this is some ambiguity in your statement that you can connect to the Internet with R. The evidence below says that you _cannot_ do so. Those files exist and at least some of those mirrors have binaries of that package for the outdated version of R that you are using.

Perhaps you need to talk to your IT staff for support in getting through your corporate securioty layers, whatever they might be in whatever unstated setup you have.

-- 
David.


> and also I have already done this package installation before 2 weeks.
> 
> Error in download.file(url, destfile = f, quiet = TRUE) :
>  cannot open URL 'https://cran.r-project.org/CRAN_mirrors.csv'
> In addition: Warning message:
> In download.file(url, destfile = f, quiet = TRUE) :
>  InternetOpenUrl failed: 'A connection with the server could not be established'
> Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib:
>  cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES'
> Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/src/contrib:
>  cannot open URL 'http://www.stats.ox.ac.uk/pub/RWin/src/contrib/PACKAGES'
> Warning: unable to access index for repository https://cran.uni-muenster.de/bin/windows/contrib/3.2:
>  cannot open URL 'https://cran.uni-muenster.de/bin/windows/contrib/3.2/PACKAGES'
> Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.2:
>  cannot open URL 'http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.2/PACKAGES'
> Warning message:
> package ‘Rtsne’ is not available (for R version 3.2.5)
> 
> 
> 
> Thanks & Regards,
> Nithya Dayalan
> AMS MRL DPS | HCL @ Merck
> E-mail: nithya.dayalan at merck.com
> Tel#+91 44 61053951| Mobile +91 8754232975
> 
> 
> -----Original Message-----
> From: Dayalan, Nithya
> Sent: Friday, August 12, 2016 10:45 AM
> To: 'Jeff Newmiller'; 'r-help at R-project.org'
> Cc: Radhakrishan, Balaji
> Subject: RE: [R] R Package installation
> 
> Yes Jeff,  I tried it with 10 mirrors.
> 
> Thanks & Regards,
> Nithya Dayalan
> AMS MRL DPS | HCL @ Merck
> E-mail: nithya.dayalan at merck.com<mailto:nithya.dayalan at merck.com>
> Tel#+91 44 61053951| Mobile +91 8754232975
> 
> -----Original Message-----
> From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us]
> Sent: Friday, August 12, 2016 10:43 AM
> To: Dayalan, Nithya; 'r-help at R-project.org'
> Cc: Radhakrishan, Balaji
> Subject: Re: [R] R Package installation
> 
> Choose
> 
> A
> 
> Different
> 
> Mirror
> --
> Sent from my phone. Please excuse my brevity.
> 
> On August 12, 2016 3:53:03 AM PDT, "Dayalan, Nithya" <nithya.dayalan at merck.com<mailto:nithya.dayalan at merck.com>> wrote:
>> Hi Team,
>> 
>> We are receiving the below message while updating the package. Please
>> help.
>> 
>>> install.packages("parallel", lib="D:/Program
>> Files/R/R-3.2.5/library")
>> Warning: unable to access index for repository
>> https://cran.fhcrc.org/src/contrib:
>> cannot open URL 'https://cran.fhcrc.org/src/contrib/PACKAGES'
>> Warning: unable to access index for repository
>> http://www.stats.ox.ac.uk/pub/RWin/src/contrib:
>> cannot open URL
>> 'http://www.stats.ox.ac.uk/pub/RWin/src/contrib/PACKAGES'
>> Warning: unable to access index for repository
>> https://cran.fhcrc.org/bin/windows/contrib/3.2:
>> cannot open URL
>> 'https://cran.fhcrc.org/bin/windows/contrib/3.2/PACKAGES'
>> Warning: unable to access index for repository
>> http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.2:
>> cannot open URL
>> 'http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.2/PACKAGES'
>> Warning messages:
>> 1: package 'parallel' is not available (for R version 3.2.5)
>> 2: package 'parallel' is a base package, and should not be updated
>>> 
>> 
>> 
>> Thanks & Regards,
>> Nithya Dayalan
>> AMS MRL DPS | HCL @ Merck
>> E-mail: nithya.dayalan at merck.com<mailto:nithya.dayalan at merck.com<mailto:nithya.dayalan at merck.com<mailto:nithya.dayalan at merck.com>>
>> Tel#+91 44 61053951| Mobile +91 8754232975
>> 
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>> attachme...{{dropped:14}}
>> 
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> 
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