firoozi_maryam6858 at yahoo.com
Wed Jan 20 22:26:38 CET 2016
i made a population about 4500 individual.this has two sex(female and male).they had pedigree.
i wanted to enter new indiviual but their ID of indiviual mustnot be same perivous and their ID number mustnot be bigger than 4500.
first population's ID number is 1:4500.
how can i handel it?
Sent from my iPhone
Begin forwarded message:
> From: maryam firoozi <firoozi_maryam6858 at yahoo.com>
> Date: January 18, 2016 at 1:14:56 AM GMT+3:30
> To: r-help at r-project.org
> we want to do genomic blup in r.i know that use pedigree package.
> the formule is
> gblup( P~1,data=ped[,c('ID','P')],M=M,lambda=1/h2-1)
> P:phenotype variance
> M: matrix marker or genotype
> my ped has 4500 ID.but my M has 9000 individual.becasue i have two row for each ID in M matrix becasue each ID has two haplotype.how can i solve it.the formula didnt solve.
> Sent from my iPhone
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