lists at dewey.myzen.co.uk
Thu Jan 21 14:33:38 CET 2016
On 20/01/2016 21:26, maryam firoozi via R-help wrote:
> i made a population about 4500 individual.
So you mean nearly 4500, not exactly 4500?
this has two sex(female and male).they had pedigree.
> i wanted to enter new indiviual but their ID of indiviual mustnot be same perivous and their ID number mustnot be bigger than 4500.
> first population's ID number is 1:4500.
If you tabulate ID you will get a table where all the entries should be
1 except for the ID which you have not yet used which will be zero.
All you need to do then is find them
> how can i handel it?
> Sent from my iPhone
> Begin forwarded message:
>> From: maryam firoozi <firoozi_maryam6858 at yahoo.com>
>> Date: January 18, 2016 at 1:14:56 AM GMT+3:30
>> To: r-help at r-project.org
>> we want to do genomic blup in r.i know that use pedigree package.
>> the formule is
>> gblup( P~1,data=ped[,c('ID','P')],M=M,lambda=1/h2-1)
>> P:phenotype variance
>> M: matrix marker or genotype
>> my ped has 4500 ID.but my M has 9000 individual.becasue i have two row for each ID in M matrix becasue each ID has two haplotype.how can i solve it.the formula didnt solve.
>> Sent from my iPhone
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