[R] Fwd: Matrix Constraints in R Optim

Jeff Newmiller jdnewmil at dcn.davis.ca.us
Fri Jun 17 23:55:18 CEST 2016


Your code is corrupt because you failed to send your email in plain text format. 

You also don't appear to have all data needed to reproduce the problem. Use the dput function to generate R code form of a sample of your data. 
-- 
Sent from my phone. Please excuse my brevity.

On June 17, 2016 1:07:21 PM PDT, Priyank Dwivedi <dpriyank23 at gmail.com> wrote:
>By mistake, I sent it earlier to the wrong address.
>
>---------- Forwarded message ----------
>From: Priyank Dwivedi <dpriyank23 at gmail.com>
>Date: 17 June 2016 at 14:50
>Subject: Matrix Constraints in R Optim
>To: r-help-owner at r-project.org
>
>
>Hi,
>
>Below is the code snippet I wrote in R:
>
>The basic idea is to minimize error by optimizing set of values (in
>this
>scenario 12) in the form of a matrix. I defined the matrix elements as
>vector "*my.data.var" * and then stacked it into a matrix called
>"*my.data.var.mat"
>in the error function. *
>
>The only part that I can't figure out is "what if the column sum in
>the *my.data.var.mat
>needs to be <=1"; that's the constraint/s.. Where do I introduce it in
>the
>OPTIM solver or elsewhere?*
>
>
>
>
>
>
>*my.data.matrix.inj* <- as.matrix(my.data)  #convert DATA FRAME to
>MATRIX
>my.data.matrix.inj
>
>
>*my.data.matrix.time* <- as.matrix(my.data.2)  #convert DATA FRAME to
>MATRIX
>my.data.matrix.time
>
>
>*my.data.matrix.prod* <- as.matrix(my.data)  #convert DATA FRAME to
>MATRIX
>my.data.matrix.prod
>
>
>*my.data.var* <-
>c(2,0.8,0.5,0.2,0.2,0.1,10,0.01,0.02,0.2,0.1,0.01,2,0.8,0.5,0.2,0.2,0.1,10,0.01,0.02,0.2,0.1,0.01,2,0.8,0.5,0.2,0.2,0.1,10,0.01,0.02,0.2,0.1,0.01)
>my.data.var
>
>*my.data.qo* <- c(5990,150,199,996)   #Pre-Waterflood Production
>
>*my.data.timet0* <- 0 # starting condition for time
>
>
>*#FUNCTIONQjk.Cal.func* <-
>function(my.data.timet0,my.data.qo,my.data.matrix.time,
>                         my.data.matrix.inj,
>my.data.matrix.prod,my.data.var,my.data.var.mat)
>{
>
>  qjk.cal.matrix <- matrix(,nrow = nrow(my.data.matrix.prod),
>ncol=ncol(my.data.matrix.prod))
>
>  count <- 1
>  number <- 1
>  for(colnum in 1:ncol(my.data.matrix.prod))   # loop through all PROD
>wells columns
>  {
>    sum <-0
>    for(row in 1:nrow(my.data.matrix.prod)) #loop through all the rows
>    {
>      sum <-0
>      deltaT <-0
>      expo <-0
>
>
>        for(column in 1:ncol(my.data.matrix.inj)) #loop through all the
>injector columns to get the PRODUCT SUM
>         {
>            sum = sum +
>my.data.matrix.inj[row,column]*my.data.var.mat[colnum,number+column]
>         }
>
>      if(count<2)
>      {
>        deltaT<- my.data.matrix.time[row]
>      }
>      else
>      {deltaT <- my.data.matrix.time[row]-my.data.matrix.time[row-1]}
>
>
>      expo <- exp(-deltaT/my.data.var.mat[colnum,1])                  #
>change here too
>
>      if(count<2)
>      {
>    qjk.cal.matrix[row,colnum] = my.data.qo[colnum]*expo + (1-expo)*sum
>      }
>      else
>      {
>        qjk.cal.matrix[row,colnum]=qjk.cal.matrix[row-1,colnum]*expo +
>(1-expo)*sum
>      }
>      count <- count+1
>    }
>
>    count <-1
>  }
>
>  qjk.cal.matrix      # RETURN CALCULATED MATRIX TO THE ERROR FUNCTION
>
>}
>
>
>*# ERROR FUNCTION* - FINDS DIFFERENCE BETWEEN CAL. MATRIX AND ORIGINAL
>MATRIX. Miminize the Error by changing my.data.var
>
>*Error.func* <- function(my.data.var)
>{
> #First convert vector(my.data.var) to MATRIX aand send it to calculate
>new MATRIX
>  *my.data.var.mat* <- matrix(my.data.var,nrow =
>ncol(my.data.matrix.prod),ncol = ncol(my.data.matrix.inj)+1,byrow =
>TRUE)
>
>*  Calc.Qjk.Value* <-
>Qjk.Cal.func(my.data.timet0,my.data.qo,my.data.matrix.time,
>                                 my.data.matrix.inj,
>my.data.matrix.prod,my.data.var,my.data.var.mat)
>
>
>  diff.values <- my.data.matrix.prod-Calc.Qjk.Value    #FIND DIFFERENCE
>BETWEEN CAL. MATRIX AND ORIGINAL MATRIX
>
>
>  Error <- ((colSums ((diff.values^2), na.rm = FALSE, dims =
>1))/nrow(my.data.matrix.inj))^0.5    #sum of square root of the diff
>  print(paste(Error))
>
>Error_total <- sum(Error,na.rm=FALSE)/ncol(my.data.matrix.prod)   #
>total
>avg error
>
>
> * Error_total*
>}
>
># OPTIMIZE
>
>*optim*(*my.data.var*
>,Error.func,method="L-BFGS-B",upper=c(Inf,1,1,1,1,1,Inf,1,1,1,1,1,Inf,1,1,1,1,1,Inf,1,1,1,1,1))
>
>
>
>-- 
>Best Regards,
>PD
>
>
>
>-- 
>Best Regards,
>Priyank Dwivedi
>
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>
>______________________________________________
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