[R] R problem : Error: protect(): protection stack overflow

Mohammad Tanvir Ahamed mashranga at yahoo.com
Tue Mar 15 14:24:38 CET 2016

Thanks . I have informed package maintainer. 
 Tanvir Ahamed 
Göteborg, Sweden   |  mashranga at yahoo.com 

----- Original Message -----
From: Martin Morgan <martin.morgan at roswellpark.org>
To: Mohammad Tanvir Ahamed <mashranga at yahoo.com>; R-help Mailing List <r-help at r-project.org>
Sent: Tuesday, 15 March 2016, 13:26
Subject: Re: [R] R problem : Error: protect(): protection stack overflow

On 03/14/2016 06:39 PM, Mohammad Tanvir Ahamed via R-help wrote:
> Hi, i got an error while i am running a big data. Error has explained
> by the following sample sample

This is an error in the package, and should be reported to the 
maintainer. Discover the maintainer with the command


> ## Load data mdata <-
> as.matrix(read.table('https://gubox.box.com/shared/static/qh4spcxe2ba5ymzjs0ynh8n8s08af7m0.txt',
> header = TRUE, check.names = FALSE, sep = '\t'))
> ## Install and load library
> source("https://bioconductor.org/biocLite.R") biocLite("impute")
> library(impute)
> ## sets a limit on the number of nested expressions
> options(expressions = 500000) ## Apply k-nearest neighbors for
> missing value imputation
> res <-impute.knn(mdata)
> Error: protect(): protection stack overflow
> If anybody has solution or suggestion, please share. Thanks .
> Tanvir Ahamed Göteborg, Sweden  |  mashranga at yahoo.com
> ______________________________________________ R-help at r-project.org
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