[R] Facing problem in installing the package named "methyAnalysis"

Pijush Das topijush at gmail.com
Fri Dec 29 13:00:06 CET 2017


Thank you Michael Dewey.
Can you please send me the email id for Bioconductor.




regards
Pijush

On Fri, Dec 29, 2017 at 5:20 PM, Michael Dewey <lists at dewey.myzen.co.uk>
wrote:

> Dear Pijush
>
> You might do better to ask on the Bioconductor list as IRanges does not
> seem to be on CRAN so I deduce it is a Bioconductor package too.
>
> Michael
>
>
> On 29/12/2017 07:29, Pijush Das wrote:
>
>> Dear Sir,
>>
>>
>>
>>
>> I have been using R for a long time. But recently I have faced a problem
>> when installing the Bioconductor package named "methyAnalysis". Firstly it
>> was require to update my older R (R version 3.4.3 (2017-11-30)) in to
>> newer
>> version. That time I have also updated the RStudio software.
>>
>> After that when I have tried to install the package named "methyAnalysis".
>> It shows some error given below.
>>
>> No methods found in package ‘IRanges’ for requests: ‘%in%’,
>> ‘elementLengths’, ‘elementMetadata’, ‘ifelse’, ‘queryHits’, ‘Rle’,
>> ‘subjectHits’, ‘t’ when loading ‘bumphunter’
>> Error: package or namespace load failed for ‘methyAnalysis’:
>>   objects ‘.__T__split:base’, ‘split’ are not exported by
>> 'namespace:IRanges'
>> In addition: Warning message:
>> replacing previous import ‘BiocGenerics::image’ by ‘graphics::image’ when
>> loading ‘methylumi’
>>
>> I also try to install the package after downloading the source package
>> from
>> Bioconductor but the method is useless.
>>
>> Please help me to install the package named "methyAnalysis".
>>
>> Thanking you
>>
>>
>>
>> regards
>> Pijush
>>
>>         [[alternative HTML version deleted]]
>>
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>>
>>
> --
> Michael
> http://www.dewey.myzen.co.uk/home.html
>

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