[R] Call `rlang::last_error()` to see a backtrace

Ana Marija @okov|c@@n@m@r|j@ @end|ng |rom gm@||@com
Thu Jul 11 00:36:09 CEST 2019


Hi Patrick,

can you please send me link to David's previous answer? I don't see it in
this thread.

Thanks
Ana

On Wed, Jul 10, 2019 at 5:17 PM Patrick (Malone Quantitative) <
malone using malonequantitative.com> wrote:

> See David's answer about this specific issue . Also, always reply to list.
>
> On Wed, Jul 10, 2019, 6:08 PM Ana Marija <sokovic.anamarija using gmail.com>
> wrote:
>
> > Hi Patrick,
> >
> > thanks for getting back to me, I tried that:
> >
> > > ukb_icd_diagnosis(my_ukb_data, eid = "1000017", icd.version = 10)
> > Error in ukb_icd_diagnosis(my_ukb_data, eid = "1000017", icd.version =
> 10)
> > :
> >   unused argument (eid = "1000017")
> >
> >
> >
> > On Wed, Jul 10, 2019 at 3:09 PM Patrick (Malone Quantitative) <
> > malone using malonequantitative.com> wrote:
> >
> >> First response: The ID column in your data is labeled "eid" but your
> >> function call refers to "id".
> >>
> >>
> >> On Wed, Jul 10, 2019 at 1:38 PM Ana Marija <sokovic.anamarija using gmail.com
> >
> >> wrote:
> >> >
> >> > Hello,
> >> >
> >> > I am trying to use this program:
> >> > https://github.com/kenhanscombe/ukbtools
> >> >
> >> > > my_ukb_data[1:3,1:3]
> >> >       eid sex_f31_0_0 year_of_birth_f34_0_0
> >> > 1 1000017      Female                  1938
> >> > 2 1000025      Female                  1951
> >> > 3 1000038        Male                  1961
> >> >
> >> > > ukb_icd_diagnosis(my_ukb_data, id = "1000017", icd.version = 10)
> >> > Error: Column 1 must be named.
> >> > Use .name_repair to specify repair.
> >> > Call `rlang::last_error()` to see a backtrace
> >> >
> >> > Function is described here:
> >> >
> >>
> https://kenhanscombe.github.io/ukbtools/reference/ukb_icd_diagnosis.html
> >> >
> >> > I run it on:
> >> >
> >> > $platform
> >> > [1] "x86_64-pc-linux-gnu"
> >> > $arch
> >> > [1] "x86_64"
> >> > $version.string
> >> > [1] "R version 3.5.0 (2018-04-23)"
> >> >
> >> > Would anyone know why this is happening?
> >> >
> >> > Thanks!
> >> >
> >> >         [[alternative HTML version deleted]]
> >> >
> >> > ______________________________________________
> >> > R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
> >> > https://stat.ethz.ch/mailman/listinfo/r-help
> >> > PLEASE do read the posting guide
> >> http://www.R-project.org/posting-guide.html
> >> > and provide commented, minimal, self-contained, reproducible code.
> >>
> >
>
>         [[alternative HTML version deleted]]
>
> ______________________________________________
> R-help using r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>

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