[BioC] affy package not loading

[A.J. Rossini]

I think you need the development version of Biobase.

best,
-tony

>>>>> "nicholas" == Nicholas Lewin-Koh <nikko@hailmail.net> writes:

    nicholas> Hi, 
    nicholas> I am trying to load the development version of the affy package and i
    nicholas> get the following error. I am using R 1.6.1 on RH linux 8.0. Any I deas?

    nicholas> Nicholas

 
    nicholas> library(affy)
    nicholas> *************
    nicholas> affy: development version
    nicholas> *************
    nicholas> The package is under major changes.
    nicholas> unpack the package and read the file NEWS to know more....
    nicholas> The draft for the new vignette (called 'affy2') is distributed with the
    nicholas> pacakge
    nicholas> *************
    nicholas> demo(affy.tour) will eventually work and give an overview...
    nicholas> *************
    nicholas> Loading required package: methods
    nicholas> Expanding the signature to include omitted arguments
    nicholas> in definition: j = "missing"

    nicholas> Attaching package `Biobase':


    nicholas>         The following object(s) are masked from package:base :

    nicholas>          split

    --> detecting normalization methods from naming convention
    --> detecting expression value methods from naming convention
    --> detecting background correction methods from naming convention
    --> detecting pm correction methods from naming convention
    --> initCdf
    --> initCel
    --> initAffyBatch
    nicholas> Error in getClass(Class) : "MIAME" is not a defined class
    nicholas> Error in library(affy) : .First.lib failed




    nicholas> _______________________________________________
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    nicholas> Bioconductor@stat.math.ethz.ch
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-- 
A.J. Rossini				Rsrch. Asst. Prof. of Biostatistics
U. of Washington Biostatistics		rossini@u.washington.edu	
FHCRC/SCHARP/HIV Vaccine Trials Net	rossini@scharp.org
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