[BioC] affy package not loading

[Rafael A. Irizarry]

you need the latest Biobase and tkWidgets.


On Wed, 6 Nov 2002, Nicholas Lewin-Koh wrote:

> Hi, 
> I am trying to load the development version of the affy package and i
> get the following error. I am using R 1.6.1 on RH linux 8.0. Any I deas?
> 
> Nicholas
> 
>  
> library(affy)
> *************
> affy: development version
> *************
> The package is under major changes.
> unpack the package and read the file NEWS to know more....
> The draft for the new vignette (called 'affy2') is distributed with the
> pacakge
> *************
> demo(affy.tour) will eventually work and give an overview...
> *************
> Loading required package: methods
> Expanding the signature to include omitted arguments
> in definition: j = "missing"
> 
> Attaching package `Biobase':
> 
> 
>         The following object(s) are masked from package:base :
> 
>          split
> 
> -->detecting normalization methods from naming convention
> -->detecting expression value methods from naming convention
> -->detecting background correction methods from naming convention
> -->detecting pm correction methods from naming convention
> -->initCdf
> -->initCel
> -->initAffyBatch
> Error in getClass(Class) : "MIAME" is not a defined class
> Error in library(affy) : .First.lib failed
> 
> 
> 
> 
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