[BioC] MAC INSTALLATION AFFY PACKAGE

[Stirewalt, Derek L]

HI,
WE ARE TRYING TO INSTALL AFFY PACKAGE AND BIOC ON A IMAC WITH OS10 AND WHEN
WE TRY TO READ A CEL FILE HERE IS WHAT WE GET: 


> library(affy)
Welcome to Bioconductor 
	 To view some introductory material -- look at our vignettes
	 Simply type: openVignette() 
	 to see the available vignettes
	 To read a vignette see the openVignette help page for details
Creating a new generic function for "summary" in package 
Biobase 

Attaching package `Biobase':


	The following object(s) are masked from package:base :

	 split summary 


Attaching package `affy':


	The following object(s) are masked from package:base :

	 barplot boxplot colnames hist history image ncol nrow 

> Data <- ReadAffy()
Error in getInfoInAffyFile(filename, "CEL", "HEADER", "DatHeader", compress =
compress) : 
	Cannot open the file Wilson:Applications:rm162::0126192.CEL.
SO IT SEEMS THAT BIOC IS ABLE TO GET AFFY WORKING BUT READNG THE CEL FILE
SEEMS T BE A TROUBLE. WE ARE RUNNING BIOC on R1.6.2 and the Affy package is
the routine one, not the developmental package.
ANY HELP WELCOME ! THANKS 

Derek L. Stirewalt, MD
Associate in Clinical Research
D4-100, FHCRC
1100 Fairview Ave N
Seattle, WA  98109
(206)-667-5113