[BioC] Problem with VSN package AGAIN

[Mahbub Latif]

Hi,

I am trying to use vsn package for analysing my data.
To show what I am facing I consider the following
example which one can reproduce.



>set.seed(123)
>cy3 <- matrix(rnorm(30,5,1),nrow=10)

>set.seed(222)
>cy5 <- matrix(rnorm(30,2,2), nrow=10)

>cy <- cbind(cy3, cy5)

>library(vsn)

Funny things are happenning. After loading vsn package
(library(vsn)) I cannot use some functions such as
summary. For example,

> summary(cy3)
Segmentation fault

or 

>cy1 <- data.frame(cy)
>cy1
Segmentation fault

and R terminated. But the same function work peoperly
before loading vsn package. Some other functions I
have cheked do not work after loading vsn package such
as plot functions of lattice package. 

It would be great if someone help me on this. Before
(when I sent my previous request) I thought this
happen only to lymphoma data but now I found loading
vsn package affects some R base functions.

>version
platform i686-pc-linux-gnu
arch     i686             
os       linux-gnu        
system   i686, linux-gnu  
status                    
major    1                
minor    7.0              
year     2003             
month    04               
day      16               
language R