[BioC] Problems Reading Cel Files

Jeff Lande land0038 at umn.edu
Tue Jul 22 17:17:46 MEST 2003


Dear List Members,

I am trying to get started by following along with the affy textual
description manual, but I'm having early problems.  I am working with 53 Cel
files, but I have been testing by attempting to load as few as two Cel
files.  In all cases, I get a similar error message.  Here's an example:

Error: cannot allocate vector of size 83170 Kb
In addition: Warning message:
Reached total allocation of 509 Mb: see help(memory.size)

I'm a little wary of changing memory allocation without having a good idea
about what I am doing.  I am working in a Windows NT environment.  Can
someone suggest a good course of action or a good (in-depth) resource on
memory allocation within R?

Thanks.

Jeff Lande
University of Minnesota



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