[BioC] problem with bioconductor install script

Bela Tiwari btiwari at ceh.ac.uk
Fri Jun 13 17:42:30 MEST 2003


Hello,

I have ran into problems trying to use the bioconductor install script
as found on the web site: http://www.bioconductor.org/

These are the errors I saw when running under the bash shell and zsh.


Running under bash shell:

sh-2.05a$ source getBioC.R
sh: getBioC.R: line 55: syntax error near unexpected token `(l'
sh: getBioC.R: line 55: `getBioC <- function (libName = "all", 
relLevel = "release",'


Running under zsh:

 source getBioC.R                                          [ 7:56]
getBioC.R:55: number expected
getBioC.R:62: no such file or directory: -
getBioC.R:69: bad pattern: writeLines(paste(Running getBioC version
,getBioCVersion,....\n,\n                     If you encounter problems,
first make sure that\n,\n                     you are running the latest
version of getBioC()\n,\n                     which can be found at:
www.bioconductor.org/getBioC.R,\n                     \n\n,\n        
            Please direct any concerns or questions to,\n               
      bioconductor at stat.math.ethz.ch.\n,sep=))


Just thought I'd let you know.

Bela




*************************
Dr. Bela Tiwari
Lead Bioinformatician

CEH Oxford
Mansfield Road
Oxford, OX1 3SR
01865 281975



More information about the Bioconductor mailing list