[BioC] (no subject)

[Laurent Gautier]

And your configuration is.... ?


On Mon, Mar 03, 2003 at 04:44:56PM -0800, Tiago R Magalhaes wrote:
> I am sorry to bother you with such an irrelevant question and I understand 
> if you can't reply to it
> 
> I am biologist working on microarrays (Affy) and I am trying to run R (I 
> have some experience on S plus)
> I tryed to install the Bioconductor Package and I cannot
> it tells me that I have to install an XML file:
> Package annotate version 1.0.5 requires package XML version >= 0.92-2, 
> would you like to try to install this package? [yes/no] yes
> 
> when I click yes it runs, dowloads something and then:
> Warning message:
> Running R version 1.6.2 and package XML was built for R version 1.6.1, 
> skipping.
> Please look at the option versForce if you would like to continue. in: 
> installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
> 
> and I am stuck
> 
> any ideas on how to solve this problem?
> 
> thanks very much
> 
> 
> tiago magalhaes
> 
> 
> (follows the all dialogue with the computer)
> 
> [1] "Getting/installing packages reposTools and Biobase"
> Package annotate version 1.0.5 requires package XML version >= 0.92-2, 
> would you like to try to install this package? [yes/no] yes
> Note: No specified download type, defaulting to Win32
> [1] "Attempting to download XML from 
> http://www.bioconductor.org//CRANrepository"
> [1] "Download complete."
> [1] "Installing XML"
> From URL:  http://www.bioconductor.org//CRANrepository
>         XML version 0.93-1
> 
> Packages that were not updated:
>         annotate
>         genefilter
>         geneplotter
>         edd
>         ROC
>         multtest
>         Biobase
>         tkWidgets
> 
> Warning message:
> Running R version 1.6.2 and package XML was built for R version 1.6.1, 
> skipping.
> Please look at the option versForce if you would like to continue. in: 
> installPkg(fileName, pkg, pkgVer, type, lib, repEntry, versForce)
> 
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