[BioC] Error message when trying to ReadAffy with widgets function: help, please?_Part 2

[Fátima Núñez]

Hello all again, 

I am trying to upload some mgu74av2 CEl files from my C:\Program
Files\R\Rwork directory

I have upgraded my R version to the latest dev version

I have Tcl/Tk 8.4 version installed

I have affy version 1.1.2

I have downloaded the mouse cdf and probe files

When I run the following the ReadAffy works OK

> alldata <- ReadAffy()
> alldata
AffyBatch object
size of arrays=640x640 features (60804 kb)
cdf=MG_U74Av2 (12488 affyids)
number of samples=19
number of genes=12488
annotation=mgu74av2
notes=

But when I try the widget option I still get:

> alldata <- ReadAffy(widget=TRUE)
Error in structure(.External("dotTcl", ..., PACKAGE = "tcltk"), class =
"tclObj") : 
        [tcl] ambiguous option "-col": must be -column, -columnspan,
-in, -ipadx, -ipady, -padx, -pady, -row, -rowspan, or -sticky.

May this have anything to do with the environment variable set up for
Tcl/Tk?

I have it as follows:

Variable name: TCL_LIBRARY

Variable value: c:\tcl\lib\tcl8.4.

Thanks again for all your suggestions,
Fatima



_______
 

 
Fátima Núñez, PhD
Centre for Cancer Research (CIC)
University of Salamanca-CSIC
Campus Unamuno
37007 Salamanca                                                   
Spain
Phone: + 34 923 294802
Fax:     + 34 923 294743
E-mail: fnunez at usal.es