[BioC] Re: webbioc configuration

Colin Smith colin at colinsmith.org
Tue Nov 25 17:22:03 MET 2003


Those are global variables that are set in the Site.pm file. The goal 
is to keep all site-specific configuration in that single file to make 
upgrading and maintenance easier.

Watch for a new version of webbioc in the next few days. I just 
committed an update with additional support for installing metadata, 
the Sun Grid Engine, canceling jobs, and e-mail status updates. (The 
update will require migrating your configuration options to a slightly 
expanded Site.pm file.)


On Nov 25, 2003, at 3:01, bioconductor-request at stat.math.ethz.ch wrote:

> Date: Mon, 24 Nov 2003 13:22:20 +0200
> From: "Ron Ophir" <Lsophir at wisemail.weizmann.ac.il>
> Subject: [BioC] webbioc configuration
> To: <bioconductor at stat.math.ethz.ch>
> Dear all,
> I am trying to install webbioc. Most of it is easy, however, I did not
> understand how do I define the UPLOAD_DIR, RESULT DIR, etc. Should I 
> run
> a script or should I set these variable as environment variable? I
> missed that option.
> Thanks,
> Ron

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