[BioC] simpleaffy qc.stats error on mouse4302 arrays

Dick Beyer dbeyer at u.washington.edu
Mon Apr 12 22:30:12 CEST 2004


I have seem to run into an error when running qc.stats on affy moe430 2 arrays.

> qc <- qc.stats(gclmko.raw,gclmko.mas5)
Getting probe level data...
Computing p-values
Doing PMA Calls
Error in qc.stats(gclmko.raw, gclmko.mas5) : 
        Sorry - I'm afraid I don't know about the spike probes on ' mouse4302cdf ' arrays.

base 1.9.0 
utils 1.9.0 
graphics 1.9.0 
stats 1.9.0 
methods 1.9.0 
affy 1.4.21 
Biobase 1.4.10 
tools 1.9.0 
gcrma 1.0.6 
simpleaffy 1.09 
mouse4302cdf 1.4.1 

Thanks,
Dick
*******************************************************************************
Richard P. Beyer, Ph.D.	University of Washington
Tel.:(206) 616 7378	Env. & Occ. Health Sci. , Box 354695
Fax: (206) 685 4696	4225 Roosevelt Way NE, # 100
			Seattle, WA 98105-6099
http://depts.washington.edu/ceeh/ServiceCores/FC5/FC5.html



More information about the Bioconductor mailing list