[BioC] recipe for installing and using Bioconductor with Mac OS X
10.3 and R GUI 1.9
fjstam at bio.vu.nl
Wed Apr 14 08:34:52 CEST 2004
...and make sure you have the Xtools installed. Affy and some other
packages like xml do not install without them.
> Dear Colleagues --
> I've been trying unsuccessfully to use Bioconductor (mostly the affy
> package) on a Mac with OS X 10.3.3, running R with a GUI, either 1.8.1
> or 1.9.0 beta. I've tried to install Bioconductor with getBioC.R,
> which doesn't work all the way, and also tried to use a shell command
> to install downloaded packages, a la R CMD INSTALL
> /path/to/pkg_version.tar.gz , which also doesn't work all the way
> (stops when it can't find a 'make' command in SHLIB.
> Suggestions? Caveats? Will this work? Shall I give up and 'switch'
> back to a PC???
> Cheers & TIA,
> Marc Salit
> Dr. Marc Salit
> Research Chemist
> Chemical Science and Technology Laboratory
> 100 Bureau Drive, Stop 8391
> Gaithersburg, MD 20899-8391
> email: Salit at NIST.gov
> voice: +1 301 975-3646
> fax: +1 301 869-0413_______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
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