[BioC] affylmGUI gene list from Venn diagram, was: (no subject)

James Wettenhall wettenhall at wehi.edu.au
Sat Jun 19 03:51:40 CEST 2004

On Fri, 18 Jun 2004, Simon Kidd wrote:
> >class(a) <- "matrix"
> >data.frame(geneIDs=geneIDs,a)

> This worked right upto the end where it gave me the following error message:
> >  data.frame(geneIDs=geneIDs,a)
> Error in data.frame(geneIDs = geneIDs, a) :
> 	arguments imply differing number of rows: 14010, 8

Sorry, my mistake.  What you need to use in the data.frame is 
the 'clas' object from classifyTestsF, not the 'a' object 
from vennCounts.

clas <- classifyTestsF(tstat,df=10,p.value=0.05)
class(clas) <- "matrix"

Hope this helps,

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