[BioC] limmaGUI and dupcor.series error

[Diego Díez Ruiz]

Hello list,

Using limmaGUI-1.1.0 I found an error trying to calculate duplicate 
correlations. limmaGUI uses dupcor.series and the error says that it is 
deprecated. Changing the call from dupcor.series to duplicateCorrelation 
in main.R seems to solve the problem. This is the main.R diff output for 
limmaGUI-1.1.0 :

3751c3751
<       Try(dupcor <- 
duplicateCorrelation(MA$M,as.matrix(design),ndups=ndups,sp
acing=spacing))
---
 >       Try(dupcor <- 
dupcor.series(MA$M,as.matrix(design),ndups=ndups,spacing=s
pacing))

Thanks.

D.