[BioC] affy segmentation fault

Ben Bolstad bolstad at stat.berkeley.edu
Tue Nov 9 23:49:05 CET 2004

Please wait for the next version of the affy package 1.6.0 which should
appear on the web in a few days. It has the requisite fix to deal with
your soybean arrays.


On Tue, 2004-11-09 at 13:46, Sucheta Tripathy wrote:
> I know we have been cluttering this mailing list with this question over
> and again. The reason I want to ask again is after seeing the segmentation
> fault error, I found it says 340000 KB to be the size it needs.
> What puzzles me is our memory is way beyond that(almost 5 GB with 10 GB
> swap memory).
> After trying all the remedies, it still fails. Can anyone suggest if in
> the source where the exact memory allocation takes place, how much is
> fixed to be the size. Can we not increase it? Or to begin with which
> version of affy package has a fix for it.
> Thanks in advance.
> Sucheta
Ben Bolstad <bolstad at stat.berkeley.edu>

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