[BioC] Time course experiment

kfbargad@ehu.es kfbargad at ehu.es
Wed Dec 7 17:52:29 CET 2005

Dear Sohail,

Limma can perform time course analysis. Just have a look at the 
manual, where there is an example of a time course experiment. Also 
there is another package called Timecourse, but I think it focuses on 
analysis of dependent data.

Hope this helps,


> Dear List,
> I have a time course experiment with three time points and 5 
replicates for each time point.  I want to  get an expression profile 
from this data, and get the differential expression for different time 
points.  I am new at this so please disregard the trivial nature of 
this question.  How can I analyze this type of data?
> Sohail Khan
> Scientific Programmer
> Genome Research Center
> 500 Sunnyside Boulevard
> Woodbury, NY 11797
> (516)422-4076
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