[BioC] Problem with RSPerl

[Duncan Temple Lang]

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1



madhurima bhattacharjee  wrote:

It gives the following error:
perl: symbol lookup error:
/usr/lib/perl5/site_perl/5.8.5/i386-linux-thread-multi/auto/R/R.so:
undefined symbol: tryEval

I am using linux with following configuration:
Linux navsari.persistent.co.in 2.6.12-1.1372_FC3 #1 Fri Jul 15 00:59:10
EDT 2005 i686 i686 i386 GNU/Linux.


One of the common reasons for this is that the version of
R you are using is not built as a shared library.
That is an optional feature that you typically have to build
from source.  Look at $R_HOME/lib/  and see if libR.so is present.
If not, that is your problem.

If it is present, then it is likely a problem with environment
variables. The RSPerl.bsh and RSPerl.csh are scripts in the
installed package that set the relevant variables for different
shells. Use one of those by sourceing it into your shell
before running the tests.

 D.


- --
Duncan Temple Lang                duncan at wald.ucdavis.edu
Department of Statistics          work:  (530) 752-4782
371 Kerr Hall                     fax:   (530) 752-7099
One Shields Ave.
University of California at Davis
Davis, CA 95616, USA
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.2 (Darwin)

iD8DBQFDoE8x9p/Jzwa2QP4RAt3XAJ9fmPCdsrGYaDKr8jZYQ6ZAskpHZQCfZ9ka
270P9lfyAFdPB75puMOPiTc=
=lg8w
-----END PGP SIGNATURE-----