[BioC] Error messages in affylmGUI on PC with respect to plotting

Richard Friedman friedman at cancercenter.columbia.edu
Fri Jul 15 17:36:13 CEST 2005

Dear Bioconductor User Group,

	I have installed affylmGUI on a PC and upon opening it  got the
error message

Error message: Error in eval(expr,envir,enclos):Object "plot Options" 
not found.

Upon using the Estrogen Test set and trying to display the Intensity 
Density Plot
I got the following error messages:

Error in FUN(newX[,i],...): wromg type for argument 2 is called massdist


Error in title(PlotTitle): Plot new has not been called yet.

As far as I know, i have installed everything asked for correctly.
(affylmGUI, TclTK, Limma, Tkrplot, affyPLM, R2HTML, and Xtable(.

I would greatly appreciate any suggestions as to how to proceed

Thanks and best wishes,
Richard A. Friedman, PhD
Associate Research Scientist
Herbert Irving Comprehensive Cancer Center
Oncoinformatics Core
Department of Biomedical Informatics
Box 95, Room 130BB or P&S 1-420C
Columbia University Medical Center
630 W. 168th St.
New York, NY 10032
(212)305-6901 (5-6901) (voice)
friedman at cancercenter.columbia.edu

" I know what is going to happen next in 'Middlemarch'.
Mr. Featherstone left Fred his money,
and the lady who wants his money is going to tell everybody
that Fred gambles and it is going to be in all the papers in 
Rose Friedman, age 8

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