[BioC] affycomp hgu133 assessment error
Ariel Chernomoretz
ariel.chernomoretz at crchul.ulaval.ca
Wed Jun 29 18:34:43 CEST 2005
Dear list,
I get the following error when trying to run affycomp on rma expressions of
the hgu133a spike in experiment,
> s.rma <-read.newspikein("eset_hgu133a/rma133.csv")
> a.rma <-assessSpikeIn2(s.rma,method.name="rma")
Performing 3 assessments that will take a few secondsError in
exprset[-spikein, ] : only 0's may mix with negative subscripts
The command runs smoothly on hgu95a data, though
Any help would be greatly appreciated
regards,
Ariel./
--
Ariel Chernomoretz, Ph.D.
Centre de recherche du CHUL
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