[BioC] Generic Loess Normalization

Sean Davis sdavis2 at mail.nih.gov
Thu Mar 3 13:18:28 CET 2005

On Mar 2, 2005, at 9:09 PM, Gene Cutler wrote:

> Of the various Bioconductor methods, is there any which performs a 
> fairly generic loess normalization, leaving out fancy stuff like 
> print-tip normalization, etc?
> I'd like to write some code based on this, so I'd like to see a 
> stripped-down example if there is one out there.

Limma has multiple methods for normalizationWithinArrays.  See the help 
page for that function.  Also, the marray package includes a (slower) 
loess normalization.


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