[BioC] load AnnBuilder and install XML
jzhang at jimmy.harvard.edu
Thu Mar 17 15:18:10 CET 2005
>I've downloaded and installed AnnBuilder. When I loaded it, I was told that
>the dependent package XML had not been installed.
>According to the manual of AnnBuilder, the XML package can be found in
>CRAN. But I can't find a windows binary there. Instead, I went to
>http://www.omegahat.org/RSXML/index.html and downloaded XML_0.97-0.zip
>I used the menu of "install packages from local zip file" and it seemed
>that I've installed XML sucessfully:
>package 'XML' successfully unpacked and MD5 sums checked
>updating HTML package descriptions
>But then when I loaded AnnBuilder, I still got:
>Loading required package: Biobase
>Loading required package: tools
>Welcome to Bioconductor
> Vignettes contain introductory material. To view,
> simply type: openVignette()
> For details on reading vignettes, see
> the openVignette help page.
>Loading required package: XML
>Error in library(pkg, character.only = TRUE, logical = TRUE, lib.loc =
> 'XML' is not a valid package -- installed < 2.0.0?
>I'm using R 2.0.1 actually.
>Is there something wrong with windows version of XML?
The XML package was built using an earlier version of R. You may have to rebuild
it under R 2.0.1.
>Thanks a lot!
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