[BioC] Re: Sequence alignment for DNA sequences (John Zhang)

[Aedin]

Hi
Might also be useful to look at some of the functions in seqinR. 

Sorry about this, but can I ask an off topic question?  Many nucleotide
alignment algorithms are available. Are we replicating the effort of
programs like Bioperl/EMBOSS etc etc in R?  What are people's experience
with RSperl and other "connectivity" modules?

Regards,
Aedin