[BioC] Low Ratio values in LIMMA

Nataliya Yeremenko eremenko at science.uva.nl
Thu Nov 10 01:13:40 CET 2005


Hello everybody

After successful importing the data to the LIMMA,
I followed all steps and finally obtained "topTable".
(the data were 44K Agilent)
I'm surprised that my data set doesn't have anything with M-values more 
than 1.5.
I well understand that it depends on the experiment,
but is there some condensation of the Ratio during normalization and 
other procedures?

regards

-- 
Dr. Nataliya Yeremenko 

Universiteit van Amsterdam
Faculty of Science
IBED/AMB (Aquatische Microbiologie)
Nieuwe Achtergracht 127
NL-1018WS Amsterdam
the Netherlands

tel. + 31 20 5257089
fax  + 31 20 5257064



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