[BioC] AnnBuilder doesn't work on gene information ("GENENAME", "SYMBOL", etc)
Luo Weijun
luo_weijun at yahoo.com
Thu Jul 13 07:03:33 CEST 2006
Thank you so much, Nianhua,
I think it works now. One more question, You suggested
me to update AnnBuilder to the lastest version,
1.10.1, since The UCSC Genome
database has updated. But I am not sure exactly how to
do it. I tried to update AnnBuilder package with
biocLite('AnnBuilder'), as well as using
update.packages(repos=biocReposList()) following
Seth¡¯s suggestion, all I got is still the old
version, AnnBuilder_1.10.0. Therefore, could you tell
me how can I update to the lastest AnnBuilder version?
This is my session info after
update.packages(repos=biocReposList())
> sessionInfo()
Version 2.3.1 (2006-06-01)
powerpc-apple-darwin8.6.0
attached base packages:
[1] "tools" "methods" "stats" "graphics"
"grDevices" "utils"
[7] "datasets" "base"
other attached packages:
AnnBuilder RSQLite DBI annotate XML
Biobase
"1.10.0" "0.4-1" "0.1-10" "1.10.0" "0.99-7"
"1.10.0"
>
I really appreciate your help!
Weijun
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