[BioC] Bayesian networks in BioC

Henrik Bengtsson hb at maths.lth.se
Sat May 27 18:11:14 CEST 2006


Another word for Bayesian networks is graphical models.

On Bioconductor, "GraphsAndNetworks" on
http://www.bioconductor.org/packages/release/Software.html is probably
a good start.  I believe geneTS is one such package.

On CRAN, a great page for this is
http://cran.r-project.org/src/contrib/Views/gR.html.

Hope this helps

Henrik

On 5/26/06, Jacob Michaelson <jjmichael at comcast.net> wrote:
> Hi all,
>
> I looked around on the BioC site for information on any
> implementations of Bayesian networks in Bioconductor.  I couldn't
> find anything.  From the literature it looks like Bayesian networks
> for gene expression has been around for almost as long as
> microarrays, yet no implementations exist in R/Bioconductor - which
> seemed a little odd to me.  Is there a reason for this?  Are Bayesian
> networks somehow dubious, or is it just that nobody has written a
> package?
>
> Would love to hear from the experts...
>
> Thanks,
>
> Jake
>
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