[BioC] about gcrma

Heidi Dvinge heidi at ebi.ac.uk
Thu Aug 2 11:11:46 CEST 2007


Hi Zhongzhong

I don't know the hthgu133a set, but have you looked at https:// 
stat.ethz.ch/pipermail/bioconductor/2006-August/014113.html ? It  
sounds like you can maybe just use hgu133aprobe?

Cheers
\Heidi

On 2 Aug 2007, at 09:40, chen zhong wrote:

> Dear bioconductor,
>
>  I am using gcrma to analyze a bunch of Affy arrays and have the  
> following
>  error:
>
>  Computing affinities[1] "Checking to see if your internet  
> connection works..."
>  [1] "Environment hthgu133acdf was not found in the Bioconductor  
> repository."
>  [1] "Checking to see if your internet connection works..."
>  [1] "Environment hthgu133aprobe was not found in the Bioconductor  
> repository."
>  Error in get(x, envir, mode, inherits) : variable "hthgu133aprobe"  
> was not found
>
>
>  I did not find hthgu133aprobe package in bioconductor. So could  
> you give me the package or suggest me to do another way to do it.  
> Thanks.
>
>  Sincerely,
>  Zhongzhong
>
>  2007-08-02
>
>
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