[BioC] KEGG package

John Zhang jzhang at jimmy.harvard.edu
Mon Aug 13 14:28:48 CEST 2007


>
>I would like to use GSEA to analyze customed microarrays. I need to map genes 
from ACC number to KEGG pathways. How can I do it using KEGG package? I could 
not find any documents for KEGG package. Is there any example?


Try the following in R to see if there is anything helpfull:

>KEGG()
>?KEGG
>?KEGGEXTID2PATHID (or any of the environment in KEGG)






>
>Best,
>
>Yihuan
>
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Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084



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