[BioC] OntoCompare Error

Johannes Graumann johannes_graumann at web.de
Fri Feb 23 17:05:41 CET 2007


Hello,

With the help of this list I succeeded in creating an annotation package
using ABPkgBuilder/AnnBuilder ("Mus.musculus.GoMap.20070223"), which
installs fine.
I then tried to run goTools' ontoCompare function like this:

result <- ontoCompare(ProtNames, probeType = "Mus.musculus.GoMap.20070223")

After a LONG time, it stops with the following:
        Error in as.vector(x, mode) : invalid argument 'mode' error

Does anyone spot what I'm doing wrong?

Thanks, Joh



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