[BioC] Rgraphviz problem

Marcelo Laia marcelolaia at gmail.com
Fri Jan 19 18:34:11 CET 2007


Hi Li and Seth,

*in the target!!!* yeaaahhh :)

> a) exporting the LD_LIBRARY_PATH environment variable before starting
>    R.  I think the following should work for you:
>
>        export LD_LIBRARY_PATH=/usr/local/lib/graphviz
>        # then start R and try Rgraphviz

I did! But not solve. My graphviz libs are under /usr/lib/graphviz: (I
did export with correct path)

>
> b) There should be a system-wide place to add paths to the ld search
>    path.  On SuSE it is /etc/ld.so.conf.  After editing this file
>    (requires root), you will also need to run ldconfig -a or some such
>    command (also as root).

I did, too! I include /usr/lib/graphviz in the /etc/ld.so.conf and run
ldconfig -v

After this, it works fine!!!!

I am very thanks to you! Thank you very much!

-- 
Marcelo Luiz de Laia
Ph.D Candidate
São Paulo State University (http://www.unesp.br/eng/)
School of Agricultural and Veterinary Sciences
Department of  Technology
Via de Acesso Prof. Paulo Donato Castellane s/n
14884-900   Jaboticabal - SP - Brazil
Phone: +55-016-3209-2675
Cell: +55-016-97098526



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