[BioC] Nimblegen analysis using Bioconductor

Rene Dreos (JIC) Rene.Dreos at bbsrc.ac.uk
Thu Jul 5 16:47:55 CEST 2007


Dear list,
I am a Bioconductor user and I would like to use its to analyse
Nimblegen expression chip for tomato, both 60 mer and 24 mer platforms
(unfortunately I don't know the ID for the 60 mer, for the 24 mer is
968).
I know that usefull packages for this type of analysis are the oligo and
makePlatformDesign. Unfortunately they need a particular file (.xys)
that I haven't. I read in bioconductor mailing list that the easier way
to have them is to contact the technical support @ Nimblegen. I try to
contact them but nothing happened... Could someone provide them for me?
Kind regards
Rene'



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