[BioC] 'recursive default argument' error in GOENTREZID2GO

Oleg Sklyar osklyar at ebi.ac.uk
Mon Jun 11 17:14:24 CEST 2007

It was reproducible *within* one session -- maybe other package's 
interference. Regarding the updates, I know I should test on R devel, 
but this is our release installation, which would be pity if it 
reproducibly occurs there.


Seth Falcon wrote:
> "James W. MacDonald" <jmacdon at med.umich.edu> writes:
>> Hi Oleg,
>> Oleg Sklyar wrote:
>>> Hi,
>>> anybody has an idea as for the following error, the example is actually 
>>> from the GO package examples. Thanks, Oleg
>>>  > library(GO)
>>>  > egId <- "10043"
>>>  > egIdGoData <- GOENTREZID2GO[[egId]]
>>> Error: recursive default argument reference
>> I sometimes see that error as well. I have no idea what causes it, as it 
>> doesn't seem repeatable. Anyway, quitting R and starting over has always 
>> fixed the problem for me.
> Oleg, is this reproducible for you?  I wasn't able to get the error.
> Have you tried updating to R patched?
> + seth

Dr Oleg Sklyar | EBI-EMBL, Cambridge CB10 1SD, UK | +44-1223-494466

More information about the Bioconductor mailing list