[BioC] AnnotationDbi package only available for R 2.6.0 or higher version?
lidaof at gmail.com
Sat Jun 16 05:16:11 CEST 2007
Thank you for reply!
On 6/15/07, Sean Davis <sdavis2 at mail.nih.gov> wrote:
> Daofeng Li wrote:
> > hi list,
> > i want to make an annotation package for Medicago.
> > i searched the mailing list and found AnnBuilder maybe help me solve this
> > i found in the ABPrimer.pdf from bioconductor.org mentions
> > AnnotationDbi as a attached package.i am wondering AnnotationDbi will
> > as a requriement for AnnBuilder.
> > so i use biocLite to install AnnBuilder,RSQLite,DBI,AnnotationDbi one by one
> > the first 3 without problem
> > but AnnotationDbi failed
> AnnotationDbi is in development and is not needed for AnnBuilder 1.14.0,
> which is the version that is to be used for R-2.5.0.
> All one needs to do to install a particular package for bioconductor is
> to use biocLite('packagename'). In this case, biocLite('AnnBuilder')
> would have been all that was needed. As for ABPrimer.pdf, make sure
> that you are using the correct version of that document. In particular,
> you need that document to match the AnnBuilder version that you are
> using. The correct version for AnnBuilder 1.14.0 does not mention
> Hope that helps.
Daofeng Li,PhD Candidate
China Agricultural University
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