[BioC] GSE normalization

Steve Taylor staylor at molbiol.ox.ac.uk
Fri Jun 22 16:05:05 CEST 2007


I have created 3 separate GSE Objects, read from SOFT format files using GeoQuery. I would like to normalise across experiments using rma. What's the best way to merge the data and then normalise? 
Ultimately I want to analyse these using limma.

Thanks for any help,


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