[BioC] AnnBuilder with custmerized GO annotation

John Zhang jzhang at jimmy.harvard.edu
Tue May 1 14:50:39 CEST 2007


                                   
>
>What do these after a GO term mean, '@E' or '@NR'?

They are evidence code by GO. Please read the description available from GO web 
site for details.


>
>What I am trying to do is to build an annotation package for GO
>enrichment analysis using GOstats. The GO annotation is from
>InterProScan. I plan to create a data frame with three columns: probeid,
>geneid and GO, then build the annotation package. Any suggestions?
>
>Thanks,
>Xinxia
>
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Jianhua Zhang
Department of Medical Oncology
Dana-Farber Cancer Institute
44 Binney Street
Boston, MA 02115-6084



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