[BioC] GO classification

Celine Carret ckc at sanger.ac.uk
Wed Oct 10 12:23:56 CEST 2007


Hi, 
you should have a look at this:
http://faculty.ucr.edu/~tgirke/Documents/R_BioCond/My_R_Scripts/goSlim.t
xt

I found it very clear, and useful, and if you don't work on human-chips
you can customise the script easily.

Best regards
Celine

-----Original Message-----
From: bioconductor-bounces at stat.math.ethz.ch
[mailto:bioconductor-bounces at stat.math.ethz.ch] On Behalf Of Ganiraju
Sent: 09 October 2007 20:37
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] GO classification

hi,

I got a set of  significant GOids by running my data using GOhypergtest
of
Gostats. Now im trying to classify these GO ids using the GO_slim
classifier. Is there any package in R which can accomplish this job??

Thanks
Gani

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