[BioC] chromosome arms missing from Affy's Mapping 500K Array Set SNP chips?

Wittner, Ben, Ph.D. Wittner.Ben at mgh.harvard.edu
Wed Sep 19 21:57:24 CEST 2007


>From inspecting the files Mapping250K_Nsp.na22.annot.csv and
Mapping250K_Sty.na22.annot.csv, which I downloaded from the Affy web site, it
seems to me that Affy's Mapping 500K Array Set SNP chips do not probe the p arms
of chromosomes 13, 14, 15 and 22.

Is that right?
If so, does anyone know why that is?

Thanks in advance.

-Ben


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